rs32550514 SNP Detail

Summary

• ID
  rs32550514
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:85703314 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAGC CCCGGCGCAC TCTGCTGGGC
  R
  GGGTCATGCT TGCACATTCC GCGTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46158780	mCV24067444	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss145398640	ENSMUSSNP7112428	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss322752767	CHEV_8_87500584	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs32550514					SNP	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:85703314 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20738	CpG island 20738	within coordinates
Junb	jun B proto-oncogene	224 bp downstream
Prdx2	peroxiredoxin 2	1874 bp downstream
Rr178234	regulatory region 178234	1914 bp distal
Rr187033	regulatory region 187033	within coordinates
Rr382406	regulatory region 382406	within coordinates
Rr401033	regulatory region 401033	1973 bp upstream
Tssr78490	transcription start site region 78490	13 bp upstream
Tssr78491	transcription start site region 78491	61 bp upstream
Tssr78492	transcription start site region 78492	1079 bp upstream
Tssr78493	transcription start site region 78493	1171 bp upstream
Tssr78494	transcription start site region 78494	1331 bp upstream
Tssr78495	transcription start site region 78495	1482 bp upstream
Tssr78496	transcription start site region 78496	1898 bp upstream
Tssr78497	transcription start site region 78497	1928 bp upstream
Tssr82215	transcription start site region 82215	348 bp upstream
Tssr82216	transcription start site region 82216	817 bp downstream
Tssr82217	transcription start site region 82217	1189 bp downstream
Tssr82218	transcription start site region 82218	1308 bp downstream
Tssr82219	transcription start site region 82219	1325 bp downstream
Tssr82220	transcription start site region 82220	1383 bp downstream
Tssr82221	transcription start site region 82221	1416 bp downstream
Tssr82222	transcription start site region 82222	1437 bp downstream
Tssr82223	transcription start site region 82223	1766 bp downstream
Tssr82224	transcription start site region 82224	1839 bp downstream