rs32554129 SNP Detail

Summary

• ID
  rs32554129
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136885817 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACAA GTGCCAAGCT GGCCTCGCCC
  Y
  CAAATCTCCA GTGGCCAAGG TTTTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45662360	mCV22554113	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss147596788	ENSMUSSNP5093981	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
ss321361803	CHEV_4_136714421	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32554129					SNP	T	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136885817 () rs orientation: forward

Symbol	Name	Function Class
Gm13003	predicted gene 13003	576 bp downstream
Gm69004	predicted gene, 69004	1745 bp upstream
Rr92603	regulatory region 92603	1216 bp distal
Rr92604	regulatory region 92604	16 bp distal
Rr92605	regulatory region 92605	1984 bp proximal
Rr96753	regulatory region 96753	930 bp proximal
Rr96754	regulatory region 96754	1537 bp proximal