rs32554302 SNP Detail

Summary

• ID
  rs32554302
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84925378 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCACT CCACCAACCT GGTGCTGGTG
  R
  GATCTAAGAT GTTCCACTTC CTGTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46159433	mCV24182181	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss145374842	ENSMUSSNP6749958	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss322748094	CHEV_8_86722648	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs32554302					SNP	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84925378 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20681	CpG island 20681	676 bp distal
Cpgi20682	CpG island 20682	within coordinates
Cpgi20683	CpG island 20683	1393 bp proximal
Gm26887	predicted gene, 26887	25 bp upstream
Gm56830	predicted gene, 56830	164 bp upstream
Gm56836	predicted gene, 56836	within coordinates
Gm64014	predicted gene, 64014	1228 bp downstream
Rr186982	regulatory region 186982	within coordinates
Rr186983	regulatory region 186983	1022 bp proximal
Rr368563	regulatory region 368563	1190 bp downstream
Tssr2623	transcription start site region 2623	1271 bp upstream
Tssr2624	transcription start site region 2624	14 bp upstream
Tssr78371	transcription start site region 78371	1333 bp downstream
Tssr82076	transcription start site region 82076	1156 bp upstream
Tssr82077	transcription start site region 82077	1069 bp upstream
Tssr82078	transcription start site region 82078	790 bp upstream
Tssr82079	transcription start site region 82079	385 bp upstream
Tssr82080	transcription start site region 82080	355 bp upstream
Tssr82081	transcription start site region 82081	326 bp upstream
Tssr82082	transcription start site region 82082	1868 bp downstream
Tssr82083	transcription start site region 82083	1981 bp downstream