rs32555201 SNP Detail

Summary

• ID
  rs32555201
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135876507 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTAGCCAC CCTTACCTTC
  CTGCTGGAGA CACCTCTCTC CTCACAGGCA TCTTGCTATT CTGAGCCAGA TGTCACAGGC
  CGAAGCCTCC TTGGGCCTGA AGCCCTATTG TCAATAGAAC CCCATGTTGT CCAAGGTACA
  AGGGATACCA CCCAAGAGCC ATGTGTGTTT AGCAGCAAGC TGCTGTCCCT CCCAATACCT
  Y
  TTCTTACTTG TTCACAAGTC TAAAACCTGT TAGGAATGGA AAGACTCACA GAATTGACAT
  ATGTGGCCTG CTCAGAGACA TTCAGAGAGT TAGAGGTGAA GACAAGACTC TTAAATTGTG
  GTGTCATGGG CTGGAGAGAT GGTTCAGAGG TTGGGCGCAC TGGCTGCTCT TCCAGAGGTC
  CTGAGTTCAA TTTCCAGCAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss45663096	mCV25111118	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T
ss147559919	ENSMUSSNP6012773	ENSEMBL	ENSEMBL_Sanger	f	SNP				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs32555201					SNP	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135876507 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15099	CpG island 15099	492 bp distal
Gm68296	predicted gene, 68296	1662 bp downstream
Rr377254	regulatory region 377254	1503 bp downstream
Rr602287	regulatory region 602287	1999 bp distal
Rr602288	regulatory region 602288	within coordinates
Rr602289	regulatory region 602289	617 bp proximal
Rr602290	regulatory region 602290	721 bp proximal
Rr602291	regulatory region 602291	1236 bp proximal
Rr602292	regulatory region 602292	1316 bp proximal
Tssr39669	transcription start site region 39669	1948 bp downstream