rs32555881 SNP Detail

Summary

• ID
  rs32555881
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:125323118 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TAATTATAA AGTCCAAGGG ACAGAACTCA
  GGACCTGAGA TTATCTAGAG TGGGTGTGAT GGAACAGCAG ATGAAGATGA CCACACTTGT
  CAGTACACAC AGCATAGCAC CAGTATTTGC CCTACCACAC CGgagttgag aggctccaaa
  Y
  acaatgatgc gtgtttaaag aaactgaaat gctattacct tgctttgatc ttacaacttg
  catacatgta tcaaattatc acactgtact ccataaatca tgtataatta AATACTAAAC
  ATATAAATCA AATACATATA AGGAGACATG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45162451	mCV24333281	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss145400706	ENSMUSSNP648552	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
ss319953757	CHEV_1_127291958	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32555881					SNP	T	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:125323118 () rs orientation: forward

Symbol	Name	Function Class
Actr3	ARP3 actin-related protein 3	within coordinates
Tssr13374	transcription start site region 13374	1604 bp upstream
Tssr13375	transcription start site region 13375	1199 bp downstream