rs32556996 SNP Detail

Summary

• ID
  rs32556996
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:144982078 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCCT AGAACTCGCT CTGTGGACCT
  Y
  GCTGGCCTCC AACTCAAAGA GCTAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss45662670	mCV22807973	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss147850353	ENSMUSSNP3218843	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T		C
ss321413248	CHEV_4_144845411	CHEVERUD	SCREENING_POP	f	SNP					T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs32556996					SNP	C	C	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144982078 () rs orientation: forward

Symbol	Name	Function Class
Gm36233	predicted gene, 36233	1368 bp downstream
Rr398674	regulatory region 398674	660 bp downstream
Rr604348	regulatory region 604348	599 bp distal
Tssr40207	transcription start site region 40207	729 bp downstream
Tssr44535	transcription start site region 44535	1048 bp upstream