rs32557071 SNP Detail

Summary

• ID
  rs32557071
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:114580149 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATCTCAAAA TAAACCATAG
  AAAGAGGGCA GAGGGTGTGG CTTGGCAGTA AAACACTTAC CTTACATTCA TGATGCTATG
  AAGTCCATCT CTTCCGCTGT GCCCCACTCT CCAATCAACT CATGATTGAG GAATCCCCAG
  TGGATTTTTC TCACCTTCAA CTTAGCATTA CATTTTATTT TCTTGTTCTA TAGACACCAA
  R
  CAGGACTCTC TGGTTACCTG TATCGGAAGG TATCCTCTCT CTGTTTTCCA CTGTGGATCT
  TACTCTGCGT GTGGTATGCT TGCTTCCCTA ATTCTATTTT TAGCCCTTTC CCAAGCTCTA
  CTGTTAAAAG TTCCTTGCTT GCCAGAGGCT AAAGAGGTGG TATTAAAACG AGGCTACTTA
  TTTCCACAAA CAAATTCAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46159465	mCV23924385	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss145776737	ENSMUSSNP4124079	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32557071					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:114580149 () rs orientation: forward

Symbol	Name	Function Class
Rr174139	regulatory region 174139	1349 bp distal
Rr179523	regulatory region 179523	52 bp proximal
Rr179524	regulatory region 179524	1052 bp proximal
Tssr82999	transcription start site region 82999	1368 bp downstream
Tssr83000	transcription start site region 83000	1400 bp downstream
Tssr83001	transcription start site region 83001	1416 bp downstream
Tssr83002	transcription start site region 83002	1431 bp downstream