rs32557119 SNP Detail

Summary

• ID
  rs32557119
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:95970363 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CACACATGAC AGGCAGCAGG GAGGCTCCGT GTTGTGCTGG AGTGACAAAG AGCAATGGAG
  GGGACAGCTG CTGGCTGCTC AGCTTTGAGT CATGGCTGGC AGACCTGTCT ACATGAATGG
  AATTCTCCAT GATCCAGGCA GGCCTCTGCT CTGGAAAGTA CATGAAGCAG GAGAGTGGGG
  ACTAGAATAT ACAAATGAGA AAAGCCCATT CACAAGGATG TGTCATTGGG AGTAATACTT
  TGAAGAGGAT CTGGGATTTC AATCTATCTG GCTGGCTGCC TCCCTCTCCT CTCTCTTTCT
  Y
  TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTTTCCT TCTCCCTCTC CCTCCCTCCC
  CCTCTCAGTA TATTGTGTAC ATATTTATCT ATACATTTGT ATATACATGT ATGTGTACAT
  GTATGTATGT ATGCATATGT GTGCATGTAT GTGTCAGGCA ACCATGGAAT GAAACCTTTG
  AAACCAAGAG CCCAAACAAA CTTTCCCTCC TTTTGCACTG ATCTGCTCAG GGGAAGGGTA
  TCACCTTGTT CGACACCAGC TACAGCACAC ACTAGGACCC AGTCTATGGC CACCCTGTGC
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss46159571	mCV24285426	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs32557119					SNP	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95970363 () rs orientation: forward

Symbol	Name	Function Class
Cngb1	cyclic nucleotide gated channel beta 1	Intron
Cpgi20868	CpG island 20868	1232 bp distal
Rr368590	regulatory region 368590	1592 bp upstream
Rr668196	regulatory region 668196	within coordinates
Rr668197	regulatory region 668197	1115 bp proximal