rs32557552 SNP Detail

Summary

• ID
  rs32557552
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:19190429 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACAA TAGTGTTCCA CTAGGACAAA
  Y
  GTATTCTGCA GACAACATGG AATCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46159958	mCV25229159	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss148777413	ENSMUSSNP6216035	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss322523291	CHEV_8_19140413	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32557552					SNP	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:19190429 () rs orientation: forward

Symbol	Name	Function Class
Gm45826	predicted gene 45826	365 bp upstream
Spag11b	sperm associated antigen 11B	346 bp upstream
Tssr76531	transcription start site region 76531	338 bp upstream
Tssr76532	transcription start site region 76532	958 bp upstream
Tssr76533	transcription start site region 76533	1016 bp upstream
Tssr76534	transcription start site region 76534	1034 bp upstream
Tssr76535	transcription start site region 76535	1069 bp upstream
Tssr80550	transcription start site region 80550	1058 bp downstream