rs32559595 SNP Detail

Summary

• ID
  rs32559595
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:73074164 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAGG AACAGGCTAG GTTACAGAGG
  R
  AGACCCTGTC CATCCTCCAG AAGGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss46160822	mCV23344033	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss322708338	CHEV_8_74844219	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs32559595					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:73074164 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20584	CpG island 20584	within coordinates
Klf2	Kruppel-like transcription factor 2 (lung)	within coordinates
Rr382266	regulatory region 382266	1576 bp upstream
Rr400967	regulatory region 400967	1193 bp downstream
Rr665301	regulatory region 665301	1971 bp distal
Rr665302	regulatory region 665302	1277 bp distal
Tssr2606	transcription start site region 2606	1412 bp upstream
Tssr77968	transcription start site region 77968	1428 bp downstream
Tssr77969	transcription start site region 77969	1405 bp downstream
Tssr77970	transcription start site region 77970	1249 bp downstream
Tssr77971	transcription start site region 77971	749 bp downstream
Tssr77972	transcription start site region 77972	713 bp downstream
Tssr77973	transcription start site region 77973	686 bp downstream
Tssr77974	transcription start site region 77974	621 bp downstream
Tssr77975	transcription start site region 77975	443 bp downstream
Tssr77976	transcription start site region 77976	219 bp downstream