rs32559944 SNP Detail

Summary

• ID
  rs32559944
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150319992 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACGTG GGAGAAAATA CAACAGAAAG
  Y
  GATGTGTTCC CTTCAGTTCT ATAGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45663057	mCV24222409	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss148050617	ENSMUSSNP1739954	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss321428723	CHEV_4_149609644	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32559944					SNP	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150319992 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15348	CpG island 15348	926 bp proximal
Eno1	enolase 1, alpha non-neuron	1186 bp upstream
Rr377416	regulatory region 377416	535 bp upstream
Rr605238	regulatory region 605238	419 bp distal
Rr605239	regulatory region 605239	927 bp proximal
Tssr40390	transcription start site region 40390	1150 bp upstream
Tssr40391	transcription start site region 40391	1235 bp upstream
Tssr40392	transcription start site region 40392	1254 bp upstream
Tssr40393	transcription start site region 40393	1267 bp upstream
Tssr40394	transcription start site region 40394	1281 bp upstream
Tssr40395	transcription start site region 40395	1667 bp upstream
Tssr40396	transcription start site region 40396	1676 bp upstream
Tssr40397	transcription start site region 40397	1768 bp upstream