rs32560275 SNP Detail

Summary

• ID
  rs32560275
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84706587 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGTCAGACC ACTGCTCCAG CTCCTCTGCC AGGGTGGAGT
  TAGGATTCTC TCTCCACCAG CACCCTACAA AGTCATCATG GTTTTGTCCC CATTTGCTCC
  Y
  GTAGAAAACT GAGACCCAGA GAGATGAGTT GTCAGAAGAC TCACAGCTCA TCCCCATCCG
  ACAGAGTCTG AGTTCCCACC CTGAAGTCCT GTCTCCCCG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46160733	mCV22734132	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C	T
ss145368189	ENSMUSSNP5971916	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		T
ss322746882	CHEV_8_86503857	CHEVERUD	SCREENING_POP	f	SNP						T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32560275					SNP	T	T	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84706587 () rs orientation: forward

Symbol	Name	Function Class
Prkaca	protein kinase, cAMP dependent, catalytic, alpha	within coordinates
Rr666366	regulatory region 666366	1835 bp distal
Tssr78320	transcription start site region 78320	1497 bp downstream
Tssr78321	transcription start site region 78321	554 bp upstream