rs32561741 SNP Detail

Summary

• ID
  rs32561741
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:157270109 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGTG ACACTCCTCA AATGAGTGCA
  W
  GCTGCCTCAT CAAACTTTGG TCCTA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45162771	mCV22693998	ABI	CRAMUS_MOUSE	f	SNP	T	A	A
ss320074084	CHEV_1_159372670	CHEVERUD	SCREENING_POP	f	SNP				T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs32561741					SNP	T	A	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:157270109 () rs orientation: forward

Symbol	Name	Function Class
Gm70539	predicted gene, 70539	within coordinates
Gm71050	predicted gene, 71050	1978 bp upstream
Rr372298	regulatory region 372298	1688 bp upstream
Rr421381	regulatory region 421381	1989 bp distal
Rr421382	regulatory region 421382	1905 bp distal
Rr421383	regulatory region 421383	1569 bp distal
Rr421384	regulatory region 421384	408 bp proximal
Tssr9590	transcription start site region 9590	1883 bp downstream