rs32565855 SNP Detail

Summary

• ID
  rs32565855
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:40966265 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTCT TCCCAAGCAA GTAAGCTATA
  M
  CCTAAAAAAA CATTGTCTAA AGAAA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46160577	mCV24410277	ABI	CRAMUS_MOUSE	f	SNP	C	C	A
ss144660322	ENSMUSSNP4638169	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss322631356	CHEV_8_41598578	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs32565855					SNP	C	C	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:40966265 () rs orientation: forward

Symbol	Name	Function Class
Cnot7	CCR4-NOT transcription complex, subunit 7	within coordinates
Cpgi20281	CpG island 20281	683 bp distal
Rr662586	regulatory region 662586	1931 bp distal
Rr662587	regulatory region 662587	1346 bp distal
Tssr2553	transcription start site region 2553	1995 bp upstream
Tssr2554	transcription start site region 2554	1736 bp downstream
Tssr76955	transcription start site region 76955	1780 bp downstream
Tssr76956	transcription start site region 76956	1437 bp downstream
Tssr76957	transcription start site region 76957	1362 bp downstream
Tssr81047	transcription start site region 81047	1950 bp upstream
Tssr81048	transcription start site region 81048	1927 bp upstream
Tssr81049	transcription start site region 81049	1878 bp upstream
Tssr81050	transcription start site region 81050	1468 bp upstream
Vps37a	vacuolar protein sorting 37A	within coordinates