rs32567884 SNP Detail

Summary

• ID
  rs32567884
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:71063354 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTAT ACGCGTCAAA TACAGTGATC
  Y
  GGCCACAGAC TTGGACTAAC GAGGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46161556	mCV22785599	ABI	CRAMUS_MOUSE	f	SNP		C	T				T		C
ss60632751	NES16282183	PERLEGEN	MM_PANEL2	f	SNP	C		T	C	C	C		T	C	C	C		T	T	C	T		C
ss145127955	ENSMUSSNP5651744	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T						C
ss322700623	CHEV_8_73134603	CHEVERUD	SCREENING_POP	f	SNP												C					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32567884					SNP	C	C	T	C	C	C	T	T	C	C	C	C	T	T	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60632751	NES16282183	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:71063354 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20475	CpG island 20475	1937 bp distal
Cpgi20476	CpG island 20476	220 bp distal
Cpgi20477	CpG island 20477	208 bp proximal
Gm45546	predicted gene 45546	within coordinates
Gm63790	predicted gene, 63790	within coordinates
Rr400904	regulatory region 400904	140 bp upstream
Rr400905	regulatory region 400905	1179 bp upstream
Rr664833	regulatory region 664833	1900 bp distal
Rr664835	regulatory region 664835	1342 bp distal
Rr664836	regulatory region 664836	301 bp distal
Rr664837	regulatory region 664837	within coordinates
Rr664838	regulatory region 664838	225 bp proximal
Rr664839	regulatory region 664839	905 bp proximal
Rr664840	regulatory region 664840	1435 bp proximal
Tssr77777	transcription start site region 77777	292 bp downstream
Tssr77778	transcription start site region 77778	within coordinates