rs32568780 SNP Detail

Summary

• ID
  rs32568780
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:155926915 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACCA GGCTGGGCTC AAACTCACCG
  R
  GATCTGTCTG CCTCTGCCTC CTGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45664351	mCV24239045	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss148117700	ENSMUSSNP2582681	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss321443291	CHEV_4_155216567	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32568780					SNP	G	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:155926915 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15490	CpG island 15490	295 bp distal
Gm68629	predicted gene, 68629	528 bp upstream
Mxra8	matrix-remodelling associated 8	within coordinates
Rr398927	regulatory region 398927	974 bp downstream
Tssr40729	transcription start site region 40729	1350 bp downstream
Tssr40730	transcription start site region 40730	1320 bp downstream
Tssr40731	transcription start site region 40731	1291 bp downstream
Tssr40732	transcription start site region 40732	1283 bp downstream
Tssr40733	transcription start site region 40733	982 bp downstream
Tssr40734	transcription start site region 40734	593 bp upstream
Tssr44980	transcription start site region 44980	1403 bp upstream
Tssr44981	transcription start site region 44981	1354 bp upstream