rs32568996 SNP Detail

Summary

• ID
  rs32568996
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:166079687 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAAAGGCAGG GCACCTGCAT TCTATGATTC CTTATGATGT
  AGTTCTTCTG CAAGACTCCT GACATGCACA TAACACTAAT TCAAAGGTCA CTTCTGTGAA
  Y
  GTTGACCTTT TAAATCAGCC CATTTCCCCT CTTTATAAAC TTTCTCATTT GTCGAAGTTT
  TGCACAAAGC TCTCAACCAG ACATTGTATG TACAAACAT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45163664	mCV23451573	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss146015775	ENSMUSSNP1280022	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32568996					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:166079687 () rs orientation: forward

Symbol	Name	Function Class
Cpgi965	CpG island 965	1680 bp proximal
Gm70596	predicted gene, 70596	411 bp downstream
Rr422555	regulatory region 422555	1585 bp proximal
Rr422556	regulatory region 422556	1994 bp proximal
Tssr9868	transcription start site region 9868	1932 bp upstream
Tssr9869	transcription start site region 9869	1977 bp upstream