rs32569372 SNP Detail

Summary

• ID
  rs32569372
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:36393275 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCCATGTC TCTAATTGGT
  ATACCTCACC CTCAAGGGGC TCAGGCTAGC CAAGGTGGAT GAAACTTATG ATAAACGGTC
  CCAGGAATGG AAACCCAGGG CTCAAAATTG GAAAAGCTTG GTAGGGTGTT TCACCCCTGA
  CCTAGACAAC TCTCTCTGGG AGTCTTCTGG AGATTCAGCA GGAGGTAGAG GACCTCTGAG
  Y
  CTTAGATGCA GTCTCAGGGG TGGTCAAGAT TGCCTCTTTG GCTCTTGGGA ACGTTGAAGG
  GGTCATAATC TGACCACCCA GTTTCAAGGT GAGTCTCCTG ACCGAGATGC CAACTCTCAG
  TTTCCCCCAT GGGCTGGCAC TGAGTGTTTG GATGTTTCTC TTTATTCATC TCCTTCCTTC
  CTCTGTCTAT TTTTAGGGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss48182517	NES11812129	PERLEGEN	MM_PANEL2	f	SNP	T	C	T	T	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs32569372					SNP	T	C	T	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48182517	NES11812129	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:36393275 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18883	CpG island 18883	448 bp proximal
Cpgi18884	CpG island 18884	1327 bp proximal
Gm36722	predicted gene, 36722	within coordinates
Gm38285	predicted gene, 38285	1588 bp upstream
Rr645552	regulatory region 645552	998 bp distal
Rr645553	regulatory region 645553	within coordinates
Rr645554	regulatory region 645554	340 bp proximal