rs32569507 SNP Detail

Summary

• ID
  rs32569507
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:119361139 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGGTGCCT CTCTTAGAAT
  TTTTCTTAGC AAGATTTCAT GGCTTAGTGT AAAATCTAGA TTTGCCATGC AGAAGTGATC
  TTTTCTTTCA CCTGCAAGGG ATTTTACAGA TAGGAAAGTG GACATTGTAA GACAAGAGCA
  TTGTAAAAGG CAGGAACTGA CTGAGCCCTT GTTGGGAAGA AAGAAATAGT ATGGATTTGA
  Y
  GAAGGGGTGT TGACATTCCT TTTTCTATTA AAAAAATGCT TAAGATCATT TTAAGTCCCA
  ACTGATTGAT CAATTTTCTG TTCTTTTTAA AAATGTGACT TCTAAAAATG TTCATTGAGA
  TAAGTCCTTT TTAAAAGCAT ATTCATTGAC AATTGCATAC ATACCTAATG TATTTTGATC
  ATATCACCCT TTATTTCTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47183627	NES11583924	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32569507					SNP	T	T	T	T	T	T	C	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47183627	NES11583924	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:119361139 () rs orientation: forward

Symbol	Name	Function Class
Acsm3	acyl-CoA synthetase medium-chain family member 3	within coordinates
Rr654652	regulatory region 654652	982 bp distal
Rr654653	regulatory region 654653	845 bp distal
Tssr68754	transcription start site region 68754	982 bp downstream
Tssr68755	transcription start site region 68755	953 bp downstream
Tssr68756	transcription start site region 68756	928 bp downstream
Tssr74499	transcription start site region 74499	1078 bp upstream