rs32571408 SNP Detail

Summary

• ID
  rs32571408
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:27750636 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCACCACTC CGGGCGGCAC GCTCTTCAGC ACCACCCCGG
  GAGGTAGGCG CTGGCCGGGG TCACGGGCGA CCTCGGGGGG CTGGAGGATA CGTCGGGATC
  Y
  GGAGTCTCAC GTGCGACGGG GAGGGCGGCA TTCGAGGGGT TCGGTAGCTG GCCAGAACGG
  ACGAGGGGCG TCGGGAAAGC AGAAGGGTCA CCGTCTCGG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46161918	mCV24519075	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32571408					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:27750636 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20220	CpG island 20220	within coordinates
Eif4ebp1	eukaryotic translation initiation factor 4E binding protein 1	within coordinates
Rr186444	regulatory region 186444	within coordinates
Tssr76776	transcription start site region 76776	276 bp downstream
Tssr76777	transcription start site region 76777	238 bp downstream
Tssr76778	transcription start site region 76778	190 bp downstream
Tssr76779	transcription start site region 76779	146 bp downstream
Tssr76780	transcription start site region 76780	99 bp downstream
Tssr76781	transcription start site region 76781	815 bp upstream