rs32573570 SNP Detail

Summary

• ID
  rs32573570
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:37299657 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCCaattaa tttataattt ttaatCCTGA
  ATAGATAAct ggggaagtag ctcagttata taaccctagc ttatacaagg ccctgggttc
  cattcccagA AGAGAAAAAA CAAAATTAAA CAGAAGAGAT TATAGAAAAA TTCAGGGTGA
  S
  TGTCAACATT AATATTAGTT ATGTCTAATA TTGTTTCTCT CAGATACACA CCACCGTCTG
  TTGTGTAGGC AGTTTAAGCC TCTTTGGTGC CCAAGTGACT GTCCCCTTCT CCGTCCTTAG
  GTTTCCTTGA GCAAGGCCTA ATGGTCAGAG                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45163867	mCV24143451	ABI	CRAMUS_MOUSE	f	SNP	C	C	G	C	C
ss148937691	ENSMUSSNP2352544	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	G		C
ss319691088	CHEV_1_37317421	CHEVERUD	SCREENING_POP	f	SNP						C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32573570					SNP	C	C	G	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:37299657 () rs orientation: forward

Symbol	Name	Function Class
Cnga3	cyclic nucleotide gated channel alpha 3	within coordinates
Cpgi160	CpG island 160	702 bp proximal
Gm69908	predicted gene, 69908	within coordinates
Rr409496	regulatory region 409496	1922 bp distal