rs32574780 SNP Detail

Summary

• ID
  rs32574780
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:129979974 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTTAAGAAAC TCAACTGCCA AGTGATTGGA GCTTCTGTGG ATTCTCACTT CTGTCATCTG
  GCATGGATTA ACACACCCAA GAAACAAGGA GGATTGGGAC CCATGAACAT TCCCTTAATA
  TCAGATCCCA AGTGCACCAT TGCTCAGAAT TATGGAGTCT TAAAGGCTGA TGAAGGTATC
  TCTTTCAGGG GCCTTTTTAT TATTGATGAT AAAGGTATCC TTCGACAGAT AACAATAAAT
  GATCTTCCCG TTGGCCGCTC TGTGGATGAG ATTATACGAC TAGTCCAGGC CTTCCAGTTC
  W
  CTGACAAACA TGGTGAAGTG TGCCCAGCTG GCTGGAAACC TGGCAGTGAT ACCATCAAAC
  CTGATGTCAA TAAGAGCAAA GAGTATTTCT CTAAGCAGAA GTGAGCACTG GACCATTTTT
  CTGCCAGGCA GCATTGAGCA GCCAGAAGAA ACTCTTGTAC TCTACTCATG CTTAAACACA
  TGATGTGGTG TGATTCTAGA TAAGCCTTTC CTACAGGGCT GGGGATGGAT AGCCTTTCTT
  CCACTATTGG TTATGGTCTG AGCTGTGTTT TGGGCAGACC ATCTTCTATC AGTCACAGAA
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46161861	mCV24003529	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32574780					SNP	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:129979974 () rs orientation: forward

Symbol	Name	Function Class
Gm21399	predicted gene, 21399	within coordinates
Gm64945	predicted gene, 64945	within coordinates
Tssr2751	transcription start site region 2751	558 bp downstream
Tssr2752	transcription start site region 2752	520 bp downstream
Tssr2753	transcription start site region 2753	248 bp downstream