rs32576521 SNP Detail

Summary

• ID
  rs32576521
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:124749079 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGGG CGAGGACAGG AAGGGAGGCC
  Y
  CTCAGTTCTG AAGGCCTGTA GTAAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss46162739	mCV23949774	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	T
ss322855971	CHEV_8_126546240	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32576521					SNP	T	C	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124749079 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21265	CpG island 21265	494 bp distal
Mir1967	microRNA 1967	301 bp upstream
Rr672602	regulatory region 672602	1343 bp distal
Rr672603	regulatory region 672603	1498 bp distal
Rr672604	regulatory region 672604	1341 bp distal
Rr672605	regulatory region 672605	453 bp distal
Taf5l	TATA-box binding protein associated factor 5 like	943 bp upstream
Tssr80012	transcription start site region 80012	1139 bp downstream
Tssr80013	transcription start site region 80013	825 bp downstream
Tssr80014	transcription start site region 80014	810 bp downstream
Tssr80015	transcription start site region 80015	761 bp downstream
Tssr83422	transcription start site region 83422	1385 bp upstream
Tssr83423	transcription start site region 83423	1234 bp upstream
Tssr83424	transcription start site region 83424	895 bp upstream
Urb2	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	within coordinates