rs32577043 SNP Detail

Summary

• ID
  rs32577043
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:79549235 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGTAAAGAG GAAAAGTTGT
  CTGTTTTGTG GCCCTTGGAA CTGTTACAAG CAAATGAGCA ATGCAGTTTC AAATTATGAC
  GAGTATTTAG AAGCAAGTAC AGACAGTGAG GCGGAGTGAA GGAGGTAAAC CTTAACAGTT
  GTCTAGATCC AGGACTTTTC CTGGAAGAAC TCAGGTGGTT TGGGCTTTCT CTCCAGGAAG
  W
  AGACTTTTGG TCTTATTTAC TTTTACATCA GAAAATAAAA GGGCTCAAGC ATTTGATATA
  ATCCAAAAGG AAGAAAAGTC AGATGTGTTC GCAAGAAGAC ACTGATTTTT GTCTTCTATG
  CAAAGCTCAG TCTTGCCTGC CATGTTCTGG TGAACTCTGT GTGGCCCTGC ACAGAGCAAA
  GTTTATTTCT TGTTTGTGTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47184359	NES11169152	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32577043					SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47184359	NES11169152	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:79549235 () rs orientation: forward

Symbol	Name	Function Class
Rad51b	RAD51 paralog B	within coordinates
Rr268384	regulatory region 268384	within coordinates