rs32577570 SNP Detail

Summary

• ID
  rs32577570
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:143578879 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACGGGGAGC GGGCCTCGGC GCTCCGCGTG
  TGCGGCGCCC TAGCGGAACC GGGCCCCGGT GCGGTCTCAA GGCTCGCACG GGGCGAGCGA
  CAGGTGCGCG CGCACCTGCT GGGCGCTTCC GCGCTTTTCA ATCCCAGAGC GCGCGCCGCC
  R
  CCGGGTGATT TAAACTTTCC CTGCGCCAGG CTCCGCTTCC CTCCCTTGAA CCCCAGGACT
  ACCTTTCTGT CTGCATCGGA GCCCCACCGC ACTCTGCGAC ATAGGTCCCC ATGGTCAGGA
  ACAGCTCCTA GGGAAAGCTG GAGCTTTGAA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss45165059	mCV23583668	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss320010260	CHEV_1_145550271	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs32577570					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:143578879 () rs orientation: forward

Symbol	Name	Function Class
Cdc73	cell division cycle 73, Paf1/RNA polymerase II complex component	248 bp upstream
Cpgi835	CpG island 835	within coordinates
Rr419927	regulatory region 419927	690 bp distal
Rr419928	regulatory region 419928	within coordinates
Rr419929	regulatory region 419929	208 bp distal
Tssr14091	transcription start site region 14091	344 bp upstream
Tssr14092	transcription start site region 14092	312 bp upstream
Tssr14093	transcription start site region 14093	294 bp upstream