rs32578810 SNP Detail

Summary

• ID
  rs32578810
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:119391094 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGATGAAG AACTGTATTA
  AGGGGTCACA GCATTAGGAA GGTTGAGAAC CACTGATCGA GATTAAGCTG GTTTCAAATT
  TATAGAGATC CACCTGTCTC TGCCTCTTGA GTGCTGGGAT TAAGGGTGTG TTGCACCATA
  CCAGGTCTGA ATATGTGAAT TATCCTGAAC ATACACTGCT TTCATAATAG CATCATTAAA
  M
  AATCAATTCC CTTAAAAGCT TATTCCAATA CCCAAAGCAG TGAGAAGCAA AGTTATAATA
  AAGCTGTGCC ATGGAATAAG TCAGAATATC AAAAGTATGC CCATTTTGTT TTACAATTAA
  ACATGAACAC AGCATGAATT AAAATATACT TTACTATTGA AAAGCCTTTT TTTTTCCAGT
  TGTATCTAAT CAAAGTTTTA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47184175	NES11599705	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32578810					SNP	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47184175	NES11599705	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:119391094 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19637	CpG island 19637	1796 bp proximal
Eri2	exoribonuclease 2	within coordinates
Rr654660	regulatory region 654660	1526 bp proximal
Tssr68757	transcription start site region 68757	1870 bp upstream