rs32579658 SNP Detail

Summary

• ID
  rs32579658
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:136506616 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CACCTCAATG AATGCACAGC TACAAAGCTC TGATGTTCAT GGCACAGCCG TGTGTCATCT
  ATAGCCAAGG GTGGTTGTAA AGATGCTTAG AAATACCTTT ATGTGCCCTG AGGTTGGGCT
  GCACACCTTT GATCCCAGCC CTTGGGAGAA AGAGGCAGGA GGATCTCTGT GAGTTTGAGG
  CTAGCCTGGT CTACAGAGCG TGTTCCAGGA CAGATAGACA GGAGTATACA GAGAAATCTT
  ATCTGGAAAA AAGAAAAAGA AAGAAACACA CACACACACA CACACACACA CACACACACA
  S
  ACAGAGAGAG AGAGAGAGAG AGAGAGACTT CATGCCATCC AATGGCTTCC ACTTTTTAAG
  TGTTCCAGCT AACTTATAAA AAGAAACTGT CTAGGGCTGG AGAGATGGCT CAGCCATTAA
  AAGCACTATC TGCTCTTCCC GAGGTCCTGA GTTCAATTCC CAGCAACCAC GTGGTGGCTC
  ACAATCATCT GTAATGGGAT CTGATGCTTC TGGGATGTCC AAAAACAGAG ACAGTATACT
  CACATACATA AAATATATAA ATCTTTTAAA AGGAGAAAAG AAAAAAAAAA AAAAAAGGAA
                                                                   
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45165732	mCV23236764	ABI	CRAMUS_MOUSE	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs32579658					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:136506616 () rs orientation: forward

Symbol	Name	Function Class
4933409D19Rik	RIKEN cDNA 4933409D19 gene	within coordinates
Gm33994	predicted gene, 33994	within coordinates
Gm57131	predicted gene, 57131	within coordinates
Rr367011	regulatory region 367011	626 bp upstream
Rr419471	regulatory region 419471	415 bp distal
Rr419472	regulatory region 419472	465 bp proximal
Rr419473	regulatory region 419473	589 bp proximal
Tssr9072	transcription start site region 9072	762 bp upstream
Tssr9073	transcription start site region 9073	788 bp upstream
Tssr13942	transcription start site region 13942	1651 bp downstream
Tssr13943	transcription start site region 13943	1676 bp downstream
Tssr13944	transcription start site region 13944	1703 bp downstream