rs32580413 SNP Detail

Summary

• ID
  rs32580413
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:33041516 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATACTGAAAA CTGTTATTCT
  AGAGTTGTTC TTCATGGTTG TTTTTCTTTA ATACTACCTC CAGTAGATGA AGTTTAGATC
  GGGAACTAAC TGGGCTTTGC TGTTCTCATC GCTGCTTGCT GGTTGGTGCT GAGATTGAGC
  GTGCCAAGGG CTCAGAGAGC TGAGCAGGTG CCCCCTCCAG TGACACTCAG CTAAAGCTGG
  R
  TTTGCCTTAT TCATCTGTAG TCTGTAAGCT CCAACCTAGA TGTCATGGTA CCTTTCACAG
  TGCTGGAGGA CATTATTTAA TCCTCCATTA TCTAACTATG AAAGGCTTTC TCTGAGGATT
  CATGTGATTA GTCAGCTCAT ACAGTGGTGT GATTTGGTGT TCATGTGTAG AAAAGGCGGT
  CTCTACCCCC TTGCTTTAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss48183980	NES12102511	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs32580413					SNP	A	A	A	A	A	A	A	A	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48183980	NES12102511	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:33041516 () rs orientation: forward

Symbol	Name	Function Class
Osbpl11	oxysterol binding protein-like 11	within coordinates
Rr317797	regulatory region 317797	516 bp distal
Rr317798	regulatory region 317798	485 bp proximal
Rr323409	regulatory region 323409	1469 bp proximal