rs32581176 SNP Detail

Summary

• ID
  rs32581176
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:161320287 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATTTAATGC ATGCTTAAAG AAATTTACTA ACATGCCATA
  TAACAAGTTA GGGCTGAGCT ATCCTGGGCA ATGCTATCAT TGGATGTGTC TAGATTAAAA
  S
  TCCACAAGGT TTCTAGCAAA TGATTCTGGC ATTCTATAAG ACAGGTAATA TTTTTGTTTT
  AACTGATGAG CAGGCTTATG TATAAAGAAC AAGGGACTT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C57BL/6J	DBA/2J	MOLF/EiJ
ss45165925	mCV23101285	ABI	CRAMUS_MOUSE	f	SNP	C	C			C	G
ss60336300	NES15836147	PERLEGEN	MM_PANEL2	f	SNP		C	C	G		G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C57BL/6J	DBA/2J	MOLF/EiJ
rs32581176					SNP	C	C	C	G	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60336300	NES15836147	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161320287 () rs orientation: forward

Symbol	Name	Function Class
Rr421810	regulatory region 421810	1618 bp proximal
Tnfsf18	tumor necrosis factor (ligand) superfamily, member 18	1937 bp upstream
Tssr9690	transcription start site region 9690	1931 bp upstream