rs32582804 SNP Detail

Summary

• ID
  rs32582804
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:126360896 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGTATCCTC TAAATAGGAA AAGTAAGTTA GAGCTATTAT
  CAGGTCAATG CTGCCCCACC CCCAACATCT TGCTTCTTTT TTCTTCTCTC TCTCCCTCTT
  Y
  TCTCCCCTCT TTGGTTTTCT TTTTGTTGTT GTTGTTTTTG TTTGTTTGTT TGTTTGTTTT
  TTGGAGACAC TGTCCTGGGA CTCGCTCTGT AGACAAGGC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45666786	mCV25174260	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss147409139	ENSMUSSNP234957	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
ss321300074	CHEV_4_126144347	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32582804					SNP	C	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:126360896 () rs orientation: forward

Symbol	Name	Function Class
Ago1	argonaute RISC catalytic subunit 1	within coordinates
Cpgi14821	CpG island 14821	713 bp proximal
Rr377145	regulatory region 377145	276 bp downstream
Rr398490	regulatory region 398490	1431 bp upstream
Rr599694	regulatory region 599694	324 bp distal
Rr599695	regulatory region 599695	117 bp proximal
Rr599696	regulatory region 599696	995 bp proximal
Rr599697	regulatory region 599697	1308 bp proximal
Rr599698	regulatory region 599698	1636 bp proximal
Tssr39001	transcription start site region 39001	941 bp downstream
Tssr43383	transcription start site region 43383	1477 bp downstream
Tssr43384	transcription start site region 43384	1593 bp downstream