rs32583844 SNP Detail

Summary

• ID
  rs32583844
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:85704116 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCTT GAGCTGCGCC ACTTGCTCCC
  K
  TAGGAGACCG GCAGCACTCG ACAGC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46163555	mCV24067446	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	G	T
ss145398645	ENSMUSSNP5460689	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		T
ss322752768	CHEV_8_87501386	CHEVERUD	SCREENING_POP	f	SNP						T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32583844					SNP	T	T	T	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:85704116 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20738	CpG island 20738	within coordinates
Junb	jun B proto-oncogene	within coordinates
Rr187033	regulatory region 187033	within coordinates
Rr382406	regulatory region 382406	within coordinates
Rr401033	regulatory region 401033	1171 bp upstream
Tssr78490	transcription start site region 78490	745 bp downstream
Tssr78491	transcription start site region 78491	730 bp downstream
Tssr78492	transcription start site region 78492	277 bp upstream
Tssr78493	transcription start site region 78493	369 bp upstream
Tssr78494	transcription start site region 78494	529 bp upstream
Tssr78495	transcription start site region 78495	680 bp upstream
Tssr78496	transcription start site region 78496	1096 bp upstream
Tssr78497	transcription start site region 78497	1126 bp upstream
Tssr78498	transcription start site region 78498	1485 bp upstream
Tssr82215	transcription start site region 82215	1150 bp upstream
Tssr82216	transcription start site region 82216	15 bp downstream
Tssr82217	transcription start site region 82217	387 bp downstream
Tssr82218	transcription start site region 82218	506 bp downstream
Tssr82219	transcription start site region 82219	523 bp downstream
Tssr82220	transcription start site region 82220	581 bp downstream
Tssr82221	transcription start site region 82221	614 bp downstream
Tssr82222	transcription start site region 82222	635 bp downstream
Tssr82223	transcription start site region 82223	964 bp downstream
Tssr82224	transcription start site region 82224	1037 bp downstream
Tssr82225	transcription start site region 82225	1222 bp downstream