rs32586090 SNP Detail

Summary

• ID
  rs32586090
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:118856426 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCATT CAGATCTGGT TCCGTCTCTT
  Y
  TTTCTTGGAA GTGAGAGCTG TTTCC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45667006	mCV24568013	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss147321770	ENSMUSSNP5900639	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32586090					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:118856426 () rs orientation: forward

Symbol	Name	Function Class
Gm12861	predicted gene 12861	within coordinates
Gm12862	predicted gene 12862	431 bp downstream
Gm12865	predicted gene 12865	1192 bp upstream
Rr398425	regulatory region 398425	323 bp upstream
Rr598451	regulatory region 598451	1571 bp distal
Rr598452	regulatory region 598452	193 bp proximal
Rr598453	regulatory region 598453	349 bp proximal
Rr598454	regulatory region 598454	1246 bp proximal