rs32587793 SNP Detail

Summary

• ID
  rs32587793
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180694150 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCTC CTGTCTCGCA TGAGCTGCTG
  Y
  GCCTGCTTTG TCAGAGGTTT ATACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	FVB/NJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss45167105	mCV24024103	ABI	CRAMUS_MOUSE	f	SNP		T	C			T
ss46721069	NES10664492	PERLEGEN	MM_PANEL2	f	SNP	T		C	T	T		T		T	T	C
ss146386933	ENSMUSSNP6092572	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
ss320160127	CHEV_1_182796716	CHEVERUD	SCREENING_POP	f	SNP								T				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	FVB/NJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs32587793					SNP	T	T	C	T	T	T	T	T	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46721069	NES10664492	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180694150 () rs orientation: forward

Symbol	Name	Function Class
Gm71256	predicted gene, 71256	1778 bp upstream
Rr424610	regulatory region 424610	1768 bp distal
Sde2	SDE2 telomere maintenance homolog (S. pombe)	within coordinates