rs32588711 SNP Detail

Summary

• ID
  rs32588711
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:4842474 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCAGGTCAAA GACATCATAT TTGCAGTAAG GAAGACTTTG
  AACATCTAAT TCGGACTTTG AATGTAAAGT CATTGAAATC TATTTAAAAT CCTTGGTGGG
  M
  CTTCACCTGA TGTGTACTGC GAGACTGCTA GTCATAAAGT TAACGCTGAA GTGACAGCAG
  GTGTCTGAAC TGTAAGAAGT TTCAATGTGC TTATGAGTG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss45167114	mCV24645187	ABI	CRAMUS_MOUSE	f	SNP	A	A				A		C
ss50908872	NES13484786	PERLEGEN	MM_PANEL2	f	SNP		A	A	A	A		A	C	A	A	A	A
ss148476180	ENSMUSSNP2153698	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A						C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs32588711					SNP	A	A	A	A	A	A	A	C	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50908872	NES13484786	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:4842474 () rs orientation: forward

Symbol	Name	Function Class
Gm6123	predicted gene 6123	52 bp downstream
Mrpl15	mitochondrial ribosomal protein L15	958 bp downstream
Rr407423	regulatory region 407423	1921 bp distal
Tssr5799	transcription start site region 5799	1129 bp downstream