rs32589557 SNP Detail

Summary

• ID
  rs32589557
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:27719888 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGAGATTTC TTCATAAGAA ACTAGAGTCG AGGGAGTCAT
  GTGTCTGCAT GTGAACGTGT GGGTGCATCA GGTGTCTCCC TCTACTATTT TCCAGTTTAT
  W
  ACCTTGAGAC AGGGTCTCTC ACAGGGCCAG AAAGCTTTTG CGTTGGCTAG GACGGTGGAG
  TCTGGGCTTT TGAGATTCGC CTGCCTCTGC TTCCCAAGG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46164722	mCV22300335	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	A
ss148886216	ENSMUSSNP3779401	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32589557					SNP	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:27719888 () rs orientation: forward

Symbol	Name	Function Class
Adrb3	adrenergic receptor, beta 3	within coordinates
Cpgi20219	CpG island 20219	1347 bp distal
Gm45470	predicted gene 45470	961 bp upstream
Rr661485	regulatory region 661485	1164 bp distal
Tssr80793	transcription start site region 80793	1819 bp upstream
Tssr80794	transcription start site region 80794	1631 bp upstream
Tssr80795	transcription start site region 80795	1341 bp upstream
Tssr80796	transcription start site region 80796	1304 bp upstream
Tssr80797	transcription start site region 80797	1273 bp upstream
Tssr80798	transcription start site region 80798	945 bp downstream