rs32592703 SNP Detail

Summary

• ID
  rs32592703
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:176541778 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCTAGGAA TACTTTGGGT
  TTTTGCTCCC CCTGGTGTTA ATCAGTTTTC TGTTTCTATG ACAAAATGCC TGATATAATC
  TATTCAAGAT AAATAATTTT TTGTCTCTCA GTTTCCAGGG TTTAAACAAA TGGTTGGTTT
  GGCTTTCCTG TTTCAGTGCA AGACTGAAGC AAGGCAGGCA CCATGGGGGA GAATGCATGA
  K
  GGAGCAATCT TGTGCAACAT GTAGCGGGCC ACACCAGGGT CTAAATAGCT TCAAGGACAT
  AATCCCAGCC ACCTAGCTTC CTTCTACTAA GGCCTATCTT CCATTGGTTG TAACACTTCC
  CAATAGTGCC ACAGTGTATC CACCATGGGC CTTTGAGTAC ATTCAAATTC TAAAATATAA
  TACTTCTAAC TAGGTTAGAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss46702088	NES10690808	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G		G	G	G	T
ss320157478	CHEV_1_178644343	CHEVERUD	SCREENING_POP	f	SNP										G					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs32592703					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46702088	NES10690808	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:176541778 () rs orientation: forward

Symbol	Name	Function Class
Rr396622	regulatory region 396622	1346 bp downstream
Rr423899	regulatory region 423899	1329 bp distal
Rr423900	regulatory region 423900	1615 bp distal