rs32593367 SNP Detail

Summary

• ID
  rs32593367
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:116847980 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACAC AATAATAAAA AATAAATATT
  W
  CCAAAAAATA CAAATGAGAG CTGGG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45668090	mCV24651373	ABI	CRAMUS_MOUSE	f	SNP	T	A	T	A
ss147282982	ENSMUSSNP1771361	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
ss321278613	CHEV_4_116663388	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32593367					SNP	T	A	T	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:116847980 () rs orientation: forward

Symbol	Name	Function Class
Rr598013	regulatory region 598013	761 bp proximal
Tssr42934	transcription start site region 42934	586 bp upstream
Tssr42935	transcription start site region 42935	402 bp upstream
Tssr42936	transcription start site region 42936	1778 bp downstream
Urod	uroporphyrinogen decarboxylase	within coordinates
Zswim5	zinc finger SWIM-type containing 5	1519 bp downstream