rs32594486 SNP Detail

Summary

• ID
  rs32594486
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:44053233 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             AGGGACGAGC CACACTCAAC CCCCCCCCTG CACATCAGGT CTGAGAGCTA
  R
  GAGCTGGGAC AGGAGTCGTC TGCAGGAGCT CAGTTGGCTA CAGAGGCCTG           
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47686400	NES11345100	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G	G	G	G	G	G	A	G	G	A	G
ss136391574	ENSMUSSNP2310048	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32594486					SNP	G	A	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47686400	NES11345100	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44053233 () rs orientation: forward

Symbol	Name	Function Class
Cbl	Casitas B-lineage lymphoma	1040 bp downstream
Mcam	melanoma cell adhesion molecule	mRNA-UTR
Rr383290	regulatory region 383290	583 bp downstream
Tssr84626	transcription start site region 84626	1327 bp downstream