rs32594597 SNP Detail

Summary

• ID
  rs32594597
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:71061688 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACAG AGGCAGGAGG ATCTCTGTGA
  R
  TTCGAGGCCA GCCTGGTCTA TATGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46165602	mCV22785567	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss145127911	ENSMUSSNP1953134	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
ss322700616	CHEV_8_73132937	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32594597					SNP	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:71061688 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20475	CpG island 20475	271 bp distal
Cpgi20476	CpG island 20476	within coordinates
Cpgi20477	CpG island 20477	1874 bp proximal
Gm45546	predicted gene 45546	1387 bp upstream
Gm63790	predicted gene, 63790	1355 bp upstream
Rr400904	regulatory region 400904	1806 bp upstream
Rr664832	regulatory region 664832	735 bp distal
Rr664833	regulatory region 664833	234 bp distal
Rr664834	regulatory region 664834	586 bp distal
Rr664835	regulatory region 664835	within coordinates
Rr664836	regulatory region 664836	865 bp proximal
Rr664837	regulatory region 664837	1366 bp proximal
Rr664838	regulatory region 664838	1891 bp proximal
Ssbp4	single stranded DNA binding protein 4	604 bp upstream
Tssr77777	transcription start site region 77777	1352 bp upstream
Tssr77778	transcription start site region 77778	1661 bp upstream
Tssr81636	transcription start site region 81636	708 bp upstream