rs32594882 SNP Detail

Summary

• ID
  rs32594882
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:184469015 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTCA ATGGGAAGTG ACAGTCAAGG
  Y
  AAGCAGTTGT TCCCATAGTA AAATC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45168409	mCV24764089	ABI	CRAMUS_MOUSE	f	SNP	C						C		T
ss60355368	NES15858850	PERLEGEN	MM_PANEL2	f	SNP		C	T	C	T	C		T		T	T		T	C	T	C		T
ss320168858	CHEV_1_186560697	CHEVERUD	SCREENING_POP	f	SNP												T					T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32594882					SNP	C	C	T	C	T	C	C	T	T	T	T	T	T	C	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60355368	NES15858850	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:184469015 () rs orientation: forward

Symbol	Name	Function Class
Gm34342	predicted gene, 34342	within coordinates
Rr425268	regulatory region 425268	744 bp distal
Rr425269	regulatory region 425269	994 bp proximal
Rr425270	regulatory region 425270	1257 bp proximal
Tssr10590	transcription start site region 10590	1409 bp downstream
Tssr15648	transcription start site region 15648	1791 bp upstream