rs32594972 SNP Detail

Summary

• ID
  rs32594972
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:44056346 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGTGGTCAG CCACATTTTT
  CTCAAGCAGG GAAGAGGCTG CAAGATCTGC AAGCAGGTGT TGGTCAGCCC CTGGCCCCTC
  CCCATAGTGC TCTTCAGCAG GCACAAAACA ATGTGCAGGG CTCTCCCTGT CCTTAGTTCT
  CCATCTCAAC TCTTGTGCTA CTTACTGGAA CCAAGAAATA CTGGTCCTTT CTCTTGCAGC
  M
  AAGCCAGATT TCCTGGGGCA CTGTGAAGGC ACATGGCACT ACTATCCCTC TGCTGCTTCA
  CTCAGGAGCT GAGACATCAA TTGAAAACCT GATGACCTGC TCTTGCCCTT CTTCCTATGT
  GCCTCAATGT GTATCTTTGG GTTAGTAGGT TACTTCTGTA TATACCAAAT GACTTGACTC
  TTTAGAAGTT AAAAGCAGGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47686432	NES11345010	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	A	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32594972					SNP	C	C	C	C	C	C	C	C	C	C	A	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47686432	NES11345010	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44056346 () rs orientation: forward

Symbol	Name	Function Class
Cbl	Casitas B-lineage lymphoma	within coordinates
Rr677565	regulatory region 677565	743 bp distal
Rr677566	regulatory region 677566	408 bp distal
Rr677567	regulatory region 677567	487 bp distal
Tssr89112	transcription start site region 89112	501 bp upstream
Tssr89113	transcription start site region 89113	316 bp upstream