rs32595056 SNP Detail

Summary

• ID
  rs32595056
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:44053852 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             CATGTGAGCT TTGGGGGCCA GGTCCTAGAG AGCCCAAGTG GGAGAATGGT
  R
  TTTAGGAGAT GAAAAACCTG GCCTAGCAAG AGCTTTTGAG GTGTGTGTGT           
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47686410	NES11345105	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	A	A	G	A	A	A	G	A	A	G	A
ss136391595	ENSMUSSNP6894645	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A						A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32595056					SNP	A	G	A	A	A	A	A	G	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47686410	NES11345105	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44053852 () rs orientation: forward

Symbol	Name	Function Class
Cbl	Casitas B-lineage lymphoma	421 bp downstream
Mcam	melanoma cell adhesion molecule	mRNA-UTR
Rr383290	regulatory region 383290	1202 bp downstream
Rr677565	regulatory region 677565	1566 bp proximal
Rr677566	regulatory region 677566	1893 bp proximal
Rr677567	regulatory region 677567	1986 bp proximal
Tssr84626	transcription start site region 84626	1946 bp downstream
Tssr89112	transcription start site region 89112	1972 bp downstream