rs32595062 SNP Detail

Summary

• ID
  rs32595062
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:44054112 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATACATATA TGTGTGTATA
  TATATATATA TATATATGGT TTTGTCTGTA AATTTGCAAA TTTTTCCTTT TATATGTGTG
  TTAGAAAAAT AAAGTGTTAT TGTTCCAAAA GCATGATGCT GTGTTCCATT CATTATGAAG
  GGACAGACCT GGGGCTTCCA AAACTATAGG TGTTTTCAGA GAGGGACAGG CTCCCAGAAG
  W
  CTGCCCTTAC CTCTAGAGTA TCCATAGCTG GCAGCATGCT ACTAAATGCT AGCTAGCGTC
  TCTGCCCCCT CCTGTGTGCC CTATTCACCT GCATCACTGC GATCGGTCCC AAAGCTACCC
  TGTGTAATTC CCCCTAACCC CAAGTGAACC AGAACTCAAG TGTGCTACAA CAAAAGAAAT
  TTTATTTAAA AATACTTTTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47686416	NES11345108	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	T	T	T	T	T	A	T	T	T
ss136391610	ENSMUSSNP816639	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	T					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32595062					SNP	T	A	T	T	T	T	T	T	T	T	A	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47686416	NES11345108	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44054112 () rs orientation: forward

Symbol	Name	Function Class
Cbl	Casitas B-lineage lymphoma	161 bp downstream
Mcam	melanoma cell adhesion molecule	88 bp downstream
Rr383290	regulatory region 383290	1462 bp downstream
Rr677565	regulatory region 677565	1306 bp proximal
Rr677566	regulatory region 677566	1633 bp proximal
Rr677567	regulatory region 677567	1726 bp proximal
Tssr89112	transcription start site region 89112	1712 bp downstream
Tssr89113	transcription start site region 89113	1898 bp downstream