rs32595559 SNP Detail

Summary

• ID
  rs32595559
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:44056968 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAAGAACA AGCTATTTTC
  GACACTGAAA ATATCCCTAT TCTAGCAAAT GTCCCAGTGT ACCTAGGAAA GTAAAGCTAA
  GGATATCACT GTAGGCTCCC CTTACAGGAA GACAAAGAGG ATGGGGATGC AGAAGACAGG
  TCAAGAGCCC ACAGAATGAA CAGGTATTCA GCACTAAAAC CAGAAGAGAG CCAAGCCAAA
  R
  GGTACTAGCT ACAGTGGAAG CCATGGTCTG CACTCTGAGT AACATCAAAG AGACCCGAGG
  TTGAATGGAG GCTAAGAAAT GCCACCCAAG GACAGAAGAG TGGCCTCAAG AGTGAGGAAA
  GCAATCTTGG GTGCCAAGAC TCCTAGGGAG AAGAAAAGTA ATTAGCAGCA AAGGTGACAG
  TGACTCTGAC TAAGTTAAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47686440	NES11345014	PERLEGEN	MM_PANEL2	f	SNP		G	G	G	G	G	A	G	G	G	A	G	G	A	G
ss136391646	ENSMUSSNP2644193	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G						G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32595559					SNP	A	G	G	G	G	G	A	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47686440	NES11345014	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44056968 () rs orientation: forward

Symbol	Name	Function Class
Cbl	Casitas B-lineage lymphoma	within coordinates
Rr677565	regulatory region 677565	1365 bp distal
Rr677566	regulatory region 677566	1030 bp distal
Rr677567	regulatory region 677567	1109 bp distal
Rr677568	regulatory region 677568	1697 bp proximal
Rr677569	regulatory region 677569	1812 bp proximal
Tssr89112	transcription start site region 89112	1123 bp upstream
Tssr89113	transcription start site region 89113	938 bp upstream