rs32595634 SNP Detail

Summary

• ID
  rs32595634
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:44054169 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATTTTTCC TTTTATATGT
  GTGTTAGAAA AATAAAGTGT TATTGTTCCA AAAGCATGAT GCTGTGTTCC ATTCATTATG
  AAGGGACAGA CCTGGGGCTT CCAAAACTAT AGGTGTTTTC AGAGAGGGAC AGGCTCCCAG
  AAGTCTGCCC TTACCTCTAG AGTATCCATA GCTGGCAGCA TGCTACTAAA TGCTAGCTAG
  Y
  GTCTCTGCCC CCTCCTGTGT GCCCTATTCA CCTGCATCAC TGCGATCGGT CCCAAAGCTA
  CCCTGTGTAA TTCCCCCTAA CCCCAAGTGA ACCAGAACTC AAGTGTGCTA CAACAAAAGA
  AATTTTATTT AAAAATACTT TTTTTTTACA GACACGGGTG CTTGAAAAAG CTCTTTAGTT
  AACTGTATGG AAATGAAAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47686418	NES11345109	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32595634					SNP	C	C	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47686418	NES11345109	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44054169 () rs orientation: forward

Symbol	Name	Function Class
Cbl	Casitas B-lineage lymphoma	104 bp downstream
Mcam	melanoma cell adhesion molecule	145 bp downstream
Rr383290	regulatory region 383290	1519 bp downstream
Rr677565	regulatory region 677565	1249 bp proximal
Rr677566	regulatory region 677566	1576 bp proximal
Rr677567	regulatory region 677567	1669 bp proximal
Tssr89112	transcription start site region 89112	1655 bp downstream
Tssr89113	transcription start site region 89113	1841 bp downstream