rs32596430 SNP Detail

Summary

• ID
  rs32596430
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:44057586 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTCATGGT CCTGCCTCAC
  GACTGCTCCG CCGTAAAAGA CTGCACCTTC AAACTATCAG ACTTAAAGGA AACCACAGTG
  GAAGAGGTAA TGAAACCACT CCATCAGTGA TGTGCACTTG AAGAGAGCAC CTCCATTCGA
  ATAGTCCATC AGTGATGTGC ACTTGAAGAG AGCACCTCCA CGCATTCACC AGGTGGTGCC
  K
  CTGCTTTCTC TGCTGCTGGA AACAAGAGGA GAAAATATTC CCACGAACAG GCAAGATGCT
  CACAGAGTCC AGTCTGGTCT TCAGCTTGTA ATAGATCCAG TGCTGGCCTA AAATTCATAA
  TTCTCCTATT TCTACTTCTA CAGAGCCGTT AAGACAGGCT TGTTCCATGA TTTCTAGGTT
  GGTGCAGATA GCTTCAGGAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47686452	NES11344915	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	T	G	G	G	G	T	T	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32596430					SNP	G	G	G	G	T	G	G	G	G	T	T	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47686452	NES11344915	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44057586 () rs orientation: forward

Symbol	Name	Function Class
Cbl	Casitas B-lineage lymphoma	within coordinates
Rr677565	regulatory region 677565	1983 bp distal
Rr677566	regulatory region 677566	1648 bp distal
Rr677567	regulatory region 677567	1727 bp distal
Rr677568	regulatory region 677568	1079 bp proximal
Rr677569	regulatory region 677569	1194 bp proximal
Tssr89112	transcription start site region 89112	1741 bp upstream
Tssr89113	transcription start site region 89113	1556 bp upstream
Tssr89114	transcription start site region 89114	1954 bp downstream