rs32596537 SNP Detail

Summary

• ID
  rs32596537
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:149414964 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATCGGTCA TCAGGGTGTC
  CATCAGAGGG TCTGTGGAGA CAGAGCAGAA CACACTAACC CTCAAGAACA AAAGCAGATG
  GTTCCTACCA GCGAGACAGT CTCAGGGAGA GCTGTGGAGC GAGCAGCCCC TCAAGCCCCT
  CAGTAAAGGA AGGCAGCAAA TGATGAAGGC CTTGCCCTGC CTTCTGTCAC TGCTGCTGGG
  W
  GGAGAAAAGA GCAAAGAGGA CAGCCAGGCA GCAGGCCCAG GGCAGAACCC TTTGCCTTAG
  AATCCAGACT CCTTCCTGAT AGTGGCAGAG CTGCCTTTAA AGTCTTCCTG GGTACCTGAT
  GAAACCGCAC TGGGGATGGT CAATGTAGGA CGGACACTGC TGCTGTCCTC AGACACACCA
  GCAGAGGGTG CCAGACTCCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46702638	NES10938179	PERLEGEN	MM_PANEL2	f	SNP	T	A	A	A	T	A	A	A	A	A	A	A	A	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32596537					SNP	T	A	A	A	T	A	A	A	A	A	A	A	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46702638	NES10938179	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149414964 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr604892	regulatory region 604892			174 bp proximal
Ube4b	ubiquitination factor E4B			Intron
				Noncoding-Transcript-Variant