rs32597075 SNP Detail

Summary

• ID
  rs32597075
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:162399790 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCAGATGATT CTAACGGAAG TAATGTGGAA TAAAGACCCC
  CAGGGCTGTG ACTCATGCAT GGATGGATAG CAGCTATGTT ATAAGTGAAG TTGTTAGTTT
  R
  AAAACAACAG GAAGCTGACT TCAATGATAT TACTTTGATT CGGGCTTCTC TTAGTGCCTT
  ACCATCAATA AACTGATATC TAAATTATTT AAATATGTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45168686	mCV22812910	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32597075					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:162399790 () rs orientation: forward

Symbol	Name	Function Class
Cpgi932	CpG island 932	608 bp distal
Rr396472	regulatory region 396472	1516 bp downstream
Rr396473	regulatory region 396473	779 bp downstream
Rr421988	regulatory region 421988	985 bp distal
Rr421989	regulatory region 421989	1674 bp distal
Rr421990	regulatory region 421990	1606 bp distal
Rr421991	regulatory region 421991	341 bp distal
Tssr9715	transcription start site region 9715	1565 bp downstream
Tssr9716	transcription start site region 9716	1549 bp downstream
Tssr9717	transcription start site region 9717	1466 bp downstream
Tssr9718	transcription start site region 9718	580 bp downstream
Tssr14622	transcription start site region 14622	1899 bp upstream
Tssr14623	transcription start site region 14623	856 bp upstream
Tssr14624	transcription start site region 14624	846 bp upstream
Tssr14625	transcription start site region 14625	813 bp upstream
Tssr14626	transcription start site region 14626	779 bp upstream
Tssr14627	transcription start site region 14627	734 bp upstream
Tssr14628	transcription start site region 14628	716 bp upstream
Tssr14629	transcription start site region 14629	681 bp upstream
Vamp4	vesicle-associated membrane protein 4	within coordinates