rs32598288 SNP Detail

Summary

• ID
  rs32598288
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:114361724 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGCT AGTGGGGTGC GCTCGTGTTG
  Y
  CCGCACACAC TAGCCCTAAG CAGCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46165359	mCV22950648	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss145772005	ENSMUSSNP3763613	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32598288					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:114361724 () rs orientation: forward

Symbol	Name	Function Class
4921521C08Rik	RIKEN cDNA 4921521C08 gene	within coordinates
Cpgi21080	CpG island 21080	within coordinates
Mon1b	MON1 homolog B, secretory traffciking associated	495 bp upstream
Rr368624	regulatory region 368624	699 bp upstream
Rr401146	regulatory region 401146	200 bp upstream
Rr670300	regulatory region 670300	5 bp proximal
Tssr79522	transcription start site region 79522	458 bp upstream
Tssr79523	transcription start site region 79523	527 bp upstream
Tssr79524	transcription start site region 79524	695 bp upstream
Tssr79525	transcription start site region 79525	756 bp upstream