rs32600150 SNP Detail

Summary

• ID
  rs32600150
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149417460 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTGCTGAC TTAGGCCAAG
  ATACAAAGGA GAATGGGTCT CCTGGGGCCC AGGGACACAA CCACAGTCTC TAATCACACC
  AGCAACAACA GAACACAAAC CAAAACCATC AAGTAAACCA ATGTCCATGA ATTTGCTTAC
  GTGAAGACTC CACCTTCCAA TGCTGCCGTT CCCTCTCCGG CCTGTGAGAC TGCACGTGAG
  R
  TTCAGAGGAG GAGCAGGATG GCAGGGTCCC CCTCTGCTCC CCAGTGTGAG AGCAAGGGGC
  CAGCGACAGG GCCTGCAGGA GCTTCTGTTT CACTGTGAGG CCTCTGCCGA GTCTGCTGCT
  CATCTTGTGA CCTTGTGAGC AGGATCTACA CTGACACCTA CACAGACTCA TCTCTTTCCA
  GCAGTGGGGG AAACTCCTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46702689	NES10938098	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32600150					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46702689	NES10938098	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149417460 () rs orientation: forward

Symbol	Name	Function Class
Tssr40324	transcription start site region 40324	1647 bp upstream
Ube4b	ubiquitination factor E4B	within coordinates
Ube4bos2	ubiquitination factor E4B, opposite strand 2	1636 bp upstream
Ube4bos3	ubiquitination factor E4B, opposite strand 3	1636 bp upstream